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400 million years ago, Prototaxites might have towered high above all other terrestrial life. Ever since its discovery, we've been trying to figure out what this massive ancient organism could possibly have been. For a while the leading theory was that it was a fungus, but recent studies suggest Prototaxites might have been something we've never seen before...
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400 million years ago, Prototaxites might have towered high above all other terrestrial life. Ever since its discovery, we've been trying to figure out what this massive ancient organism could possibly have been. For a while the leading theory was that it was a fungus, but recent studies suggest Prototaxites might have been something we've never seen before...
Hosted by: Savannah Geary (they/them)
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Support us for $8/month on Patreon and keep SciShow going!
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Or support us directly: https://complexly.com/support
Join our SciShow email list to get the latest news and highlights:
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Huge thanks go to the following Patreon supporters for helping us keep SciShow free for everyone forever: Shaji John, Timos Gies, Jon Coffman, Anita, Anne Herrington, Ashley Moquin, yeyette, David Johnston, Cye Stoner, Jp Lynch, Bethany Matthews, Chris Curry, J.V. Rosenbalm, Blood Doctor Kelly, Toyas Dhake, Reed Spilmann, Eric Jensen, Garrett Galloway, Lyndsay Brown, Jeremy Mattern, Chris Mackey, Matt Curls, Friso, Jaap Westera, Jason A Saslow, Adam Brainard, Chris Peters, Piya Shedden, Kevin Knupp, Joseph Ruf, Jacob Puthoff, Kevin Bealer, Steve Gums, Alex Hackman
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If you strolled along a shoreline 420 million years ago, you would tower over just about every living thing in sight.
You’d be stepping over tiny plants and bugs, most of which wouldn’t even come up to your ankles. That is, until you stumbled across one of the world’s first giants: an enormous tree-trunk-like organism so big that you couldn’t wrap your arms around it.
This is Prototaxites, and I can tell you it’s not a tree. But I also can’t tell you what it is. That’s because scientists have spent more than a century and a half trying to classify these ancient giants, and they still haven’t settled on an answer!
Over the decades it’s been called “plant”, “algae”, and “fungus”, but one hypothesis is gaining traction. Prototaxites might be something completely different— an entirely unknown lineage of life that could deserve a Kingdom all its own. [♪INTRO] In 1843, a Canadian geologist named William E. Logan collected a bunch of plant fossils from a place called Seal Cove in Quebec.
They were around 400 million years old, making them some of the oldest land plants in the fossil record. A decade later, Logan passed some of these fossils along to another Canadian geologist, John William Dawson, who was particularly interested in what appeared to be a chunk of fossilized wood from some sort of small tree. After close examination, Dawson decided that it was indeed the wood of an ancient tree.
More than likely a partially rotted ancient log, judging by the presence of what seemed to be fossilized fungi. He identified the tree as a conifer related to modern yews, which belong to the scientific genus Taxus. He gave this “proto-yew” a fitting name: Prototaxites.
Dawson was pretty proud of his discovery, but it wasn’t long before another scientist came along to rain on his Prototaxites parade. In the 1870s, a British botanist named William Carruthers took a look at the fossil and proclaimed that the microscopic structure was all wrong for wood. Instead, he identified it as some sort of ancient algae.
Being a pair of prominent scientists in the late 1800s, the two men naturally treated their academic disagreement with the appropriate level of politeness and civility. In 1871, Dawson called Carruthers’ identification an “entire mistake,” a “blunder” that could “only be excused by defective observations or imperfect specimens.” In 1872, Carruthers countered, “If Dr. Dawson knew anything whatever about a vegetable cell, he would not have written such nonsense.” In the 1880s, more excavations in Quebec uncovered very tree-trunk-shaped, full cylindrical fragments of Prototaxites, which Dawson considered excellent support for his conifer identification.
Meanwhile, Carruthers tried to officially change the name of Prototaxites to distance it from Dawson’s coniferous theory. Both men were pretty rude, and— in a satisfying bit of scientific karma— they were both wrong. We’re now pretty certain that Prototaxites is neither tree nor algae, but we still don’t know what it actually is!
To this day, scientists continue to debate the identity of these very confusing fossils, but they mostly have better manners about it. You see, for most of Earth’s history, the continents were pretty much empty of life. It wasn’t until a little more than 400 million years ago that enough species emerged from the sea to establish complex ecosystems on land.
We think Prototaxites was a purely land-lubbing creature because it’s found almost exclusively in sites along ancient shorelines and other terrestrial habitats. The only exceptions are the occasional specimens found among ocean fossils, which probably represent individuals that got washed out to sea. So in those early ecosystems, Prototaxites really stood above the rest… literally!
Some of the fossils are massive chunks of trunk more than a meter across and over eight meters long! These were by far the largest living things on land in their time. They were the Earth’s first terrestrial giants, towering above their centimeter-scale neighbors.
They also would have served as concentrated nutritional hubs. Some fossils have bore-holes made by hungry ancient arthropods, and it’s likely that Prototaxites was an all-you-can-eat buffet for a whole variety of little critters. So at a glance, Prototaxites might sound a lot like a tree, but the similarities end with the trunk.
For one thing, they don’t appear to have had branches like trees do. And under the microscope, Prototaxites’ tissues do not look like wood—there are none of wood’s characteristic structures, such as spiraling or closely-bundled fibers. Instead Prototaxites’ tissues are woven layers of tube-like filaments.
On the other hand, these filaments form concentric layers of the trunk, again, reminiscent of tree rings. This confusing combination of traits makes it challenging to determine how Prototaxites lived its life… or even which direction it grew! Most artwork depicts Prototaxites standing upright like a tree, and it’s often described as reaching high into the sky, towering over the rest of the ecosystem.
Like what we did at the beginning of this episode. But some scientists point out that there isn’t much evidence to support this. Prototaxites trunks have a pretty consistent width throughout, unlike tree trunks which taper to help stabilize it against wind and gravity.
And while there are cases of fossil tree stumps preserved in their original upright position, no such fossils are known for Prototaxites. So it’s possible that Prototaxites grew horizontally along the ground, or perhaps even below ground like the roots of a tree. Or some scientists have compared Prototaxites to fungal structures called rhizomorphs, root-like tubes of bundled fungus tissue.
And all this mystery adds to the confusion over what Prototaxites is. The debate has outlived Dawson and Carruthers. Over the years, scientists have tried classifying Prototaxites as just about everything: plant, seaweed, green algae, red algae, fungus, or even some sort of symbiotic relationship like lichens.
Gradually, we’ve been ruling them out. We’ll tell you everything Prototaxites isn’t right after this quick ad break. This SciShow video is supported by DeleteMe, the hands-free subscription service that removes your personal information, like addresses and phone numbers, from hundreds of data broker and people search sites.
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Let’s start with what we know for sure: Prototaxites is definitely eukaryotic. Its cells are complex. And they have walls, which we can see thanks to some incredible fossils that preserve its microscopic tissue structure.
So it can’t be a prokaryotic organism like bacteria. Having cell walls also means it can’t be an animal, though that’s never been a particularly popular suggestion anyway. Plants are eukaryotes, but Prototaxites isn’t a plant.
Not only is its microscopic structure all wrong, as Carruthers so delicately pointed out, but it also doesn’t appear to have been photosynthesizing. Paleontologists can get clues about how an ancient organism got its energy by counting carbon isotopes in the fossils. See, if you get your food by eating things, the carbon you’re taking in depends on what you’re eating.
But photosynthesizers … just photosynthesize. So their carbon acquisition system is very consistent, and they’ll end up with very consistent carbon signals, even in their fossils. But when researchers examine the carbon isotopes of Prototaxites across different fossil sites, they see a lot of variation, suggesting Prototaxites was a consumer, not a photosynthesizer.
This is a pretty strong strike against plants and algae. So, like I said before, Dawson and Carruthers were both wrong. It also casts doubt on another popular suggestion: that Prototaxites was a lichen.
Lichens are very unique structures, made of fungal tubes with algae inside—an inseparable symbiotic relationship. The fungi feed on decomposing matter, the algae get energy from the sun, and they share the bountiful harvest. So if Prototaxites was some sort of giant, lichen-like symbiotic structure, a variable carbon isotope might be expected.
BUT no one has ever found fossil evidence of symbiotic organisms living among Prototaxites tissues, even in those extremely well-preserved fossils that retain microscopic cellular structures. And besides that, Prototaxites just isn’t shaped like a photosynthesizer. A good photosynthesizer has a lot of surface area per volume, to absorb as much sunlight as possible without feeding too much tissue.
This is why leaves are leaf-shaped, because being flat and thin means they can do lots of light-capturing without being very energetically expensive. But Prototaxites is just a big thick trunk. There’s no evidence of branches or leaf-like structures to spread out and capture the sunlight.
Even if it did stand up tall, which is a great strategy for catching rays, it would have way too much bulk and not enough surface. So, if we’ve ruled out plants, animals, algae, and all manner of prokaryotes, that really only leaves us with one option: fungus. And Prototaxites does seem to check off a lot of fungal features.
Fungi are eukaryotes, closely related to animals. Like animals, they have complex cells, but unlike animals, fungi have cell walls. Check!
Fungi eat stuff, mainly feeding by breaking down organic material and absorbing it into their cells. Check! Fungi build their bodies of filamentous tubes called hyphae, which sometimes weave together into dense, complex structures like mushrooms and rhizomorphs.
Check! And we already know fungi were part of ancient ecosystems, since more recognizable fungus fossils are found alongside Prototaxites. For a long time, the only major mark against fungi seemed to be Prototaxites’ incredible size.
It would be Earth history’s most humongous fungus by a wide margin. Nevertheless, the most popular Prototaxites hypothesis in recent decades is that it was some kind of giant fungal fruiting body or root-like structure. But this theory is far from airtight… Every time scientists try to place Prototaxites within a known fungal family, it doesn’t quite fit.
What’s more, researchers are discovering little details about Prototaxites’ anatomy and chemistry that just don’t line up with any known fungi, modern or ancient. So there’s one final possibility. Maybe Prototaxites isn’t a fungus, or a plant, or an algae. Maybe it doesn’t belong to any known lineage of life.
Maybe it’s a totally separate, extinct type of eukaryotic life-form. At least that’s the case a 2026 study makes, after documenting a whole bunch of these non-fungus features. Which, in sum, make it seem more likely than ever that Prototaxites isn’t fungal after all.
In that study, researchers took a very close look at chunks of Prototaxites from a site called the Rhynie Chert in Scotland. At around 407 million years old, it’s one of the oldest known terrestrial communities in the fossil record, and it’s loaded with lots of plant and fungus fossils. Although Prototaxites is constructed of woven tubes, a lot like fungi, the scientists found that the tubes make complex, branching intersections unlike anything seen in known fungal species.
Researchers suspect these structures were sites of gas and nutrient exchange, and might have helped Prototaxites efficiently manage resources so it could grow to such prodigious sizes. This is a really neat insight into the physiology of these ancient species, while also nudging them another small step farther away from fungi. And in a giant leap, when the researchers examined the fossil’s chemical composition, they didn’t find any of the molecular building blocks you’d expect a fungus to have.
Specifically, their analysis didn’t turn up any of the evidence you’d expect if Prototaxites’ tissues had beta-glucan or chitin, both of which are universal fungal cell components. Now, you might argue that those molecules could have gotten warped by the fossilization process, rendering them unrecognizable to chemical analysis. But the researchers thought of that.
They did the same analysis on fossil fungi from the same site, and did find the expected molecules. So, unless something strange and unique happened to Prototaxites during fossilization— something that didn’t happen to anyone else— it looks like it’s missing some of the fundamental fungal ingredients. In light of these results, some experts suggest that the evidence simply doesn’t support identifying Prototaxites as a fungus.
At this point, the most logical answer might be that Prototaxites was completely different, part of an entirely unknown and extinct family of complex, multicellular life. Of course, this one study won’t end a debate that’s been raging for 160 years. It’s still possible that Prototaxites is a fungus, just a very odd one.
But as time goes on, the idea of a fungal Prototaxites seems less and less likely. So for now, Prototaxites’ classification remains a mystery, and leaves a gaping hole in our understanding of early terrestrial life. Prototaxites was among the most important organisms in the earliest terrestrial ecosystems.
At its size, it likely played a major ecological role in early terrestrial ecosystems, providing a habitat and a source of nutrients for all sorts of other organisms. And for another thing, Prototaxites wasn’t around very long! Around 370 million years ago, these giants vanished, meaning it was only around for about 50 million years.
That’s pretty short in geologic terms! If we can learn more about how it functioned, then we’ll better understand the intricacies of ancient ecosystems as they adapted to life on land, and maybe it’d also help us understand why it went extinct. Land ecosystems as we know them might never have evolved without that early Prototaxites-world.
So we owe a lot to Prototaxites and its role on ancient Earth, even if we don’t know what it is… yet! [♪OUTRO]
You’d be stepping over tiny plants and bugs, most of which wouldn’t even come up to your ankles. That is, until you stumbled across one of the world’s first giants: an enormous tree-trunk-like organism so big that you couldn’t wrap your arms around it.
This is Prototaxites, and I can tell you it’s not a tree. But I also can’t tell you what it is. That’s because scientists have spent more than a century and a half trying to classify these ancient giants, and they still haven’t settled on an answer!
Over the decades it’s been called “plant”, “algae”, and “fungus”, but one hypothesis is gaining traction. Prototaxites might be something completely different— an entirely unknown lineage of life that could deserve a Kingdom all its own. [♪INTRO] In 1843, a Canadian geologist named William E. Logan collected a bunch of plant fossils from a place called Seal Cove in Quebec.
They were around 400 million years old, making them some of the oldest land plants in the fossil record. A decade later, Logan passed some of these fossils along to another Canadian geologist, John William Dawson, who was particularly interested in what appeared to be a chunk of fossilized wood from some sort of small tree. After close examination, Dawson decided that it was indeed the wood of an ancient tree.
More than likely a partially rotted ancient log, judging by the presence of what seemed to be fossilized fungi. He identified the tree as a conifer related to modern yews, which belong to the scientific genus Taxus. He gave this “proto-yew” a fitting name: Prototaxites.
Dawson was pretty proud of his discovery, but it wasn’t long before another scientist came along to rain on his Prototaxites parade. In the 1870s, a British botanist named William Carruthers took a look at the fossil and proclaimed that the microscopic structure was all wrong for wood. Instead, he identified it as some sort of ancient algae.
Being a pair of prominent scientists in the late 1800s, the two men naturally treated their academic disagreement with the appropriate level of politeness and civility. In 1871, Dawson called Carruthers’ identification an “entire mistake,” a “blunder” that could “only be excused by defective observations or imperfect specimens.” In 1872, Carruthers countered, “If Dr. Dawson knew anything whatever about a vegetable cell, he would not have written such nonsense.” In the 1880s, more excavations in Quebec uncovered very tree-trunk-shaped, full cylindrical fragments of Prototaxites, which Dawson considered excellent support for his conifer identification.
Meanwhile, Carruthers tried to officially change the name of Prototaxites to distance it from Dawson’s coniferous theory. Both men were pretty rude, and— in a satisfying bit of scientific karma— they were both wrong. We’re now pretty certain that Prototaxites is neither tree nor algae, but we still don’t know what it actually is!
To this day, scientists continue to debate the identity of these very confusing fossils, but they mostly have better manners about it. You see, for most of Earth’s history, the continents were pretty much empty of life. It wasn’t until a little more than 400 million years ago that enough species emerged from the sea to establish complex ecosystems on land.
We think Prototaxites was a purely land-lubbing creature because it’s found almost exclusively in sites along ancient shorelines and other terrestrial habitats. The only exceptions are the occasional specimens found among ocean fossils, which probably represent individuals that got washed out to sea. So in those early ecosystems, Prototaxites really stood above the rest… literally!
Some of the fossils are massive chunks of trunk more than a meter across and over eight meters long! These were by far the largest living things on land in their time. They were the Earth’s first terrestrial giants, towering above their centimeter-scale neighbors.
They also would have served as concentrated nutritional hubs. Some fossils have bore-holes made by hungry ancient arthropods, and it’s likely that Prototaxites was an all-you-can-eat buffet for a whole variety of little critters. So at a glance, Prototaxites might sound a lot like a tree, but the similarities end with the trunk.
For one thing, they don’t appear to have had branches like trees do. And under the microscope, Prototaxites’ tissues do not look like wood—there are none of wood’s characteristic structures, such as spiraling or closely-bundled fibers. Instead Prototaxites’ tissues are woven layers of tube-like filaments.
On the other hand, these filaments form concentric layers of the trunk, again, reminiscent of tree rings. This confusing combination of traits makes it challenging to determine how Prototaxites lived its life… or even which direction it grew! Most artwork depicts Prototaxites standing upright like a tree, and it’s often described as reaching high into the sky, towering over the rest of the ecosystem.
Like what we did at the beginning of this episode. But some scientists point out that there isn’t much evidence to support this. Prototaxites trunks have a pretty consistent width throughout, unlike tree trunks which taper to help stabilize it against wind and gravity.
And while there are cases of fossil tree stumps preserved in their original upright position, no such fossils are known for Prototaxites. So it’s possible that Prototaxites grew horizontally along the ground, or perhaps even below ground like the roots of a tree. Or some scientists have compared Prototaxites to fungal structures called rhizomorphs, root-like tubes of bundled fungus tissue.
And all this mystery adds to the confusion over what Prototaxites is. The debate has outlived Dawson and Carruthers. Over the years, scientists have tried classifying Prototaxites as just about everything: plant, seaweed, green algae, red algae, fungus, or even some sort of symbiotic relationship like lichens.
Gradually, we’ve been ruling them out. We’ll tell you everything Prototaxites isn’t right after this quick ad break. This SciShow video is supported by DeleteMe, the hands-free subscription service that removes your personal information, like addresses and phone numbers, from hundreds of data broker and people search sites.
DeleteMe has been the leading expert in Personally Identifiable Information removal for over 15 years and was recently named by Wirecutter as the #1 data-removal service. They’re trusted by creators, election workers, medical providers, and our executive producer! She signed up and had tons of listings removed for her.
They also made it easy for her to request removal of additional listings herself with the click of a button. You can join all those folks using DeleteMe with the QR code on screen or at joindeleteme.com/SCISHOW with the promo code SCISHOW at checkout. You’ll get 20% off DeleteMe consumer plans.
Let’s start with what we know for sure: Prototaxites is definitely eukaryotic. Its cells are complex. And they have walls, which we can see thanks to some incredible fossils that preserve its microscopic tissue structure.
So it can’t be a prokaryotic organism like bacteria. Having cell walls also means it can’t be an animal, though that’s never been a particularly popular suggestion anyway. Plants are eukaryotes, but Prototaxites isn’t a plant.
Not only is its microscopic structure all wrong, as Carruthers so delicately pointed out, but it also doesn’t appear to have been photosynthesizing. Paleontologists can get clues about how an ancient organism got its energy by counting carbon isotopes in the fossils. See, if you get your food by eating things, the carbon you’re taking in depends on what you’re eating.
But photosynthesizers … just photosynthesize. So their carbon acquisition system is very consistent, and they’ll end up with very consistent carbon signals, even in their fossils. But when researchers examine the carbon isotopes of Prototaxites across different fossil sites, they see a lot of variation, suggesting Prototaxites was a consumer, not a photosynthesizer.
This is a pretty strong strike against plants and algae. So, like I said before, Dawson and Carruthers were both wrong. It also casts doubt on another popular suggestion: that Prototaxites was a lichen.
Lichens are very unique structures, made of fungal tubes with algae inside—an inseparable symbiotic relationship. The fungi feed on decomposing matter, the algae get energy from the sun, and they share the bountiful harvest. So if Prototaxites was some sort of giant, lichen-like symbiotic structure, a variable carbon isotope might be expected.
BUT no one has ever found fossil evidence of symbiotic organisms living among Prototaxites tissues, even in those extremely well-preserved fossils that retain microscopic cellular structures. And besides that, Prototaxites just isn’t shaped like a photosynthesizer. A good photosynthesizer has a lot of surface area per volume, to absorb as much sunlight as possible without feeding too much tissue.
This is why leaves are leaf-shaped, because being flat and thin means they can do lots of light-capturing without being very energetically expensive. But Prototaxites is just a big thick trunk. There’s no evidence of branches or leaf-like structures to spread out and capture the sunlight.
Even if it did stand up tall, which is a great strategy for catching rays, it would have way too much bulk and not enough surface. So, if we’ve ruled out plants, animals, algae, and all manner of prokaryotes, that really only leaves us with one option: fungus. And Prototaxites does seem to check off a lot of fungal features.
Fungi are eukaryotes, closely related to animals. Like animals, they have complex cells, but unlike animals, fungi have cell walls. Check!
Fungi eat stuff, mainly feeding by breaking down organic material and absorbing it into their cells. Check! Fungi build their bodies of filamentous tubes called hyphae, which sometimes weave together into dense, complex structures like mushrooms and rhizomorphs.
Check! And we already know fungi were part of ancient ecosystems, since more recognizable fungus fossils are found alongside Prototaxites. For a long time, the only major mark against fungi seemed to be Prototaxites’ incredible size.
It would be Earth history’s most humongous fungus by a wide margin. Nevertheless, the most popular Prototaxites hypothesis in recent decades is that it was some kind of giant fungal fruiting body or root-like structure. But this theory is far from airtight… Every time scientists try to place Prototaxites within a known fungal family, it doesn’t quite fit.
What’s more, researchers are discovering little details about Prototaxites’ anatomy and chemistry that just don’t line up with any known fungi, modern or ancient. So there’s one final possibility. Maybe Prototaxites isn’t a fungus, or a plant, or an algae. Maybe it doesn’t belong to any known lineage of life.
Maybe it’s a totally separate, extinct type of eukaryotic life-form. At least that’s the case a 2026 study makes, after documenting a whole bunch of these non-fungus features. Which, in sum, make it seem more likely than ever that Prototaxites isn’t fungal after all.
In that study, researchers took a very close look at chunks of Prototaxites from a site called the Rhynie Chert in Scotland. At around 407 million years old, it’s one of the oldest known terrestrial communities in the fossil record, and it’s loaded with lots of plant and fungus fossils. Although Prototaxites is constructed of woven tubes, a lot like fungi, the scientists found that the tubes make complex, branching intersections unlike anything seen in known fungal species.
Researchers suspect these structures were sites of gas and nutrient exchange, and might have helped Prototaxites efficiently manage resources so it could grow to such prodigious sizes. This is a really neat insight into the physiology of these ancient species, while also nudging them another small step farther away from fungi. And in a giant leap, when the researchers examined the fossil’s chemical composition, they didn’t find any of the molecular building blocks you’d expect a fungus to have.
Specifically, their analysis didn’t turn up any of the evidence you’d expect if Prototaxites’ tissues had beta-glucan or chitin, both of which are universal fungal cell components. Now, you might argue that those molecules could have gotten warped by the fossilization process, rendering them unrecognizable to chemical analysis. But the researchers thought of that.
They did the same analysis on fossil fungi from the same site, and did find the expected molecules. So, unless something strange and unique happened to Prototaxites during fossilization— something that didn’t happen to anyone else— it looks like it’s missing some of the fundamental fungal ingredients. In light of these results, some experts suggest that the evidence simply doesn’t support identifying Prototaxites as a fungus.
At this point, the most logical answer might be that Prototaxites was completely different, part of an entirely unknown and extinct family of complex, multicellular life. Of course, this one study won’t end a debate that’s been raging for 160 years. It’s still possible that Prototaxites is a fungus, just a very odd one.
But as time goes on, the idea of a fungal Prototaxites seems less and less likely. So for now, Prototaxites’ classification remains a mystery, and leaves a gaping hole in our understanding of early terrestrial life. Prototaxites was among the most important organisms in the earliest terrestrial ecosystems.
At its size, it likely played a major ecological role in early terrestrial ecosystems, providing a habitat and a source of nutrients for all sorts of other organisms. And for another thing, Prototaxites wasn’t around very long! Around 370 million years ago, these giants vanished, meaning it was only around for about 50 million years.
That’s pretty short in geologic terms! If we can learn more about how it functioned, then we’ll better understand the intricacies of ancient ecosystems as they adapted to life on land, and maybe it’d also help us understand why it went extinct. Land ecosystems as we know them might never have evolved without that early Prototaxites-world.
So we owe a lot to Prototaxites and its role on ancient Earth, even if we don’t know what it is… yet! [♪OUTRO]



